{"id":69301,"date":"2019-12-06T07:29:21","date_gmt":"2019-12-06T06:29:21","guid":{"rendered":"https:\/\/renewable-carbon.eu\/news\/?p=69301"},"modified":"2019-12-03T13:38:25","modified_gmt":"2019-12-03T12:38:25","slug":"the-greenest-diet-bacteria-switch-to-eating-carbon-dioxide","status":"publish","type":"post","link":"https:\/\/renewable-carbon.eu\/news\/the-greenest-diet-bacteria-switch-to-eating-carbon-dioxide\/","title":{"rendered":"The Greenest Diet: Bacteria Switch to Eating Carbon Dioxide"},"content":{"rendered":"<p><strong>Bacteria in the lab of <a href=\"http:\/\/www.weizmann.ac.il\/plants\/Milo\/\" target=\"_blank\">Prof. Ron Milo<\/a> of the Weizmann Institute of Science have not just sworn off sugar \u2013 they have stopped eating all of their normal solid food, existing instead on carbon dioxide (CO<sub>2<\/sub>) from their environment. That is, they were able to build all of their biomass from air.\u00a0This feat, which involved nearly a decade of rational design, genetic engineering and a sped-up version of evolution in the lab, <a href=\"https:\/\/www.cell.com\/cell\/fulltext\/S0092-8674(19)31230-9?utm_medium=homepage\" target=\"_blank\">was reported this week in Cell<\/a>. The findings point to means of developing, in the future, carbon-neutral fuels.<\/strong><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"alignnone  wp-image-69303\" src=\"https:\/\/renewable-carbon.eu\/news\/wp-content\/uploads\/2019\/12\/Milo_slider..jpg\" alt=\"Milo_slider.\" width=\"551\" height=\"321\" srcset=\"https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_slider..jpg 687w, https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_slider.-300x175.jpg 300w, https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_slider.-600x349.jpg 600w\" sizes=\"auto, (max-width: 551px) 100vw, 551px\" \/><\/p>\n<p>The study began by identifying crucial genes for the process of carbon fixation \u2013 the way plants take carbon from CO<sub>2<\/sub> for the purpose of turning it into such biological molecules as protein, DNA, etc. The research team added and rewired the needed genes. They found that many of the \u201cparts\u201d for the machinery that were already present in the bacterial genome could be used as is. They also inserted a gene that allowed the bacteria to get energy from a readily available substance called formate that can be produced directly from electricity and air and which is apt to \u201cgive up\u201d electrons to the bacteria.<\/p>\n<p>Just giving the bacteria the \u201cmeans of production\u201d was not enough, it turned out, for them to make the switch. There was still a need for another trick to get the bacteria to use this machinery properly, and this involved a delicate balancing act. Together with Roee Ben-Nissan, Yinon Bar-On and other members of Milo\u2019s team in the Institute\u2019s Plant and Environmental Sciences Department, Gleizer used lab evolution, as the technique is known; in essence, the bacteria were gradually weaned off the sugar they were used to eating. At each stage, cultured bacteria were given just enough sugar to keep them from complete starvation, as well as plenty of CO<sub>2<\/sub> and formate. As some \u201clearned\u201d to develop a taste for CO<sub>2<\/sub> (giving them an evolutionary edge over those that stuck to sugar), their descendants were given less and less sugar until after about a year of adapting to the new diet some of them eventually made the complete switch, living and multiplying in an environment that served up pure CO<sub>2<\/sub>.<\/p>\n<h3>The bacteria\u2019s new \u201chealth kick\u201d could ultimately be healthy for the planet<\/h3>\n<p>To check whether the bacteria were not somehow \u201csnacking\u201d on other nutrients, some of the evolved E. coli were fed CO<sub>2<\/sub> containing a heavy isotope \u2013 C13. Then the bacterial body parts were weighed, and the weight they had gained checked against the mass that would be added from eating the heavier version of carbon. The analysis showed the carbon atoms in the body of the bacteria were all extracted directly from CO<sub>2<\/sub> alone.<\/p>\n<p>The research team then set out to characterize the newly-evolved bacteria. What changes were essential to adapting to this new diet? While some of the genetic changes they identified may have been tied to surviving hunger, others appeared to regulate the synchronization of the steps of making building blocks through accumulation from CO<sub>2<\/sub>.<\/p>\n<p>\u201cThe cell needs to balance between toxic congestion and bankruptcy,\u201d says Bar-On. Yet other changes the team noted had to do with transcription \u2013 regulating how existing genes are turned on and off. \u201cFurther research will hopefully uncover exactly how these genes have adjusted their activities,\u201d says Ben-Nissan.<\/p>\n<figure id=\"attachment_69304\" aria-describedby=\"caption-attachment-69304\" style=\"width: 559px\" class=\"wp-caption alignnone\"><a href=\"https:\/\/wis-wander.weizmann.ac.il\/sites\/default\/files\/Milo_press%20release%20autotrophic%20E.%20coli%20final%20version_0.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-69304\" src=\"https:\/\/renewable-carbon.eu\/news\/wp-content\/uploads\/2019\/12\/Milo_press-release-autotrophic-E.-coli-final-version_0.jpg\" alt=\"Milo_press release autotrophic E. coli final version_0\" width=\"559\" height=\"118\" srcset=\"https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_press-release-autotrophic-E.-coli-final-version_0.jpg 1200w, https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_press-release-autotrophic-E.-coli-final-version_0-300x64.jpg 300w, https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_press-release-autotrophic-E.-coli-final-version_0-1024x217.jpg 1024w, https:\/\/renewable-carbon.eu\/news\/media\/2019\/12\/Milo_press-release-autotrophic-E.-coli-final-version_0-600x127.jpg 600w\" sizes=\"auto, (max-width: 559px) 100vw, 559px\" \/><\/a><figcaption id=\"caption-attachment-69304\" class=\"wp-caption-text\">Researchers converted the common lab, sugar-eating (heterotrophic) E. coli bacterium (left) to producing all of its biomass from CO2 (autotrophic), using metabolic engineering combined with lab evolution. The new bacterium (center) uses the compound formate as a form of chemical energy to drive CO2 fixation by a synthetic metabolic pathway. The bacterium may provide the infrastructure for the future renewable production of food and green fuels (right)<\/figcaption><\/figure>\n<p>The researchers believe that the bacteria\u2019s new \u201chealth kick\u201d could ultimately be healthy for the planet. Milo points out that today, biotech companies use cell cultures to produce commodity chemicals. Such cells \u2013 yeast or bacteria \u2013 could be induced to live on a diet of CO<sub>2<\/sub> and renewable electricity, and thus be weaned from the large amounts of corn syrup they live on today. Bacteria could be further adapted so that rather than taking their energy from a substance such as formate, they might be able to get it straight up &#8212; say electrons from a solar collector \u2013 and then store that energy for later use as fuel in the form of carbon fixed in their cells. Such fuel would be carbon-neutral if the source of its carbon was atmospheric CO<sub>2<\/sub>.<\/p>\n<p>\u201cOur lab was the first to pursue the idea of changing the diet of a normal heterotroph (one that eats organic substances) to convert it to autotrophism (\u2018living on air\u2019),\u201d says Milo. \u201cIt sounded impossible at first, but it has taught us numerous lessons along the way, and in the end we showed it indeed can be done. Our findings are a significant milestone toward our goal of efficient, green scientific applications.\u201d<\/p>\n<p>Prof. Ron Milo is the\u00a0Head of the Mary and Tom Beck &#8211; Canadian Center for Alternative Energy Research. His research is supported by the\u00a0Zuckerman STEM Leadership Program; the\u00a0Larson Charitable Foundation New Scientist Fund; the\u00a0Ullmann Family Foundation;\u00a0Dana and Yossie Hollander; and the\u00a0European Research Council. Prof. Milo is the incumbent of the\u00a0Charles and Louise Gartner Professorial Chair.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Bacteria in the lab of Prof. Ron Milo of the Weizmann Institute of Science have not just sworn off sugar \u2013 they have stopped eating all of their normal solid food, existing instead on carbon dioxide (CO2) from their environment. That is, they were able to build all of their biomass from air.\u00a0This feat, which [&#8230;]<\/p>\n","protected":false},"author":59,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_seopress_robots_primary_cat":"","nova_meta_subtitle":"","footnotes":""},"categories":[5572],"tags":[13383,5627,10743],"supplier":[7921,3797],"class_list":["post-69301","post","type-post","status-publish","format-standard","hentry","category-bio-based","tag-bacteria","tag-energy","tag-useco2","supplier-european-research-council","supplier-weizmann-institute-of-science"],"_links":{"self":[{"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/posts\/69301","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/users\/59"}],"replies":[{"embeddable":true,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/comments?post=69301"}],"version-history":[{"count":0,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/posts\/69301\/revisions"}],"wp:attachment":[{"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/media?parent=69301"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/categories?post=69301"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/tags?post=69301"},{"taxonomy":"supplier","embeddable":true,"href":"https:\/\/renewable-carbon.eu\/news\/wp-json\/wp\/v2\/supplier?post=69301"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}